HL_5FCJ_088

3D structure

PDB id

5FCJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the anisomycin-containing uL3 W255C mutant 80S yeast ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

GCUAACCUUGAGUCCUUGUGGCUCUUGGCGAAC

Length

33 nucleotides

Bulged bases

5FCJ|1|2|U|719, 5FCJ|1|2|U|721, 5FCJ|1|2|G|732

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5FCJ|1|2|G|703
5FCJ|1|2|C|704
5FCJ|1|2|U|705
5FCJ|1|2|A|706
5FCJ|1|2|A|707
5FCJ|1|2|C|708
5FCJ|1|2|C|709
5FCJ|1|2|U|710
5FCJ|1|2|U|711
5FCJ|1|2|G|712
5FCJ|1|2|A|713
5FCJ|1|2|G|714
5FCJ|1|2|U|715
5FCJ|1|2|C|716
5FCJ|1|2|C|717
5FCJ|1|2|U|718
5FCJ|1|2|U|719
5FCJ|1|2|G|720
5FCJ|1|2|U|721
5FCJ|1|2|G|722
5FCJ|1|2|G|723
5FCJ|1|2|C|724
5FCJ|1|2|U|725
5FCJ|1|2|C|726
5FCJ|1|2|U|727
5FCJ|1|2|U|728
5FCJ|1|2|G|729
5FCJ|1|2|G|730
5FCJ|1|2|C|731
5FCJ|1|2|G|732
5FCJ|1|2|A|733
5FCJ|1|2|A|734
5FCJ|1|2|C|735

Current chains

Chain 2

18S ribosomal RNA

Nearby chains

Chain S4

40S ribosomal protein S4-A