HL_5FCJ_170
3D structure
- PDB id
- 5FCJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the anisomycin-containing uL3 W255C mutant 80S yeast ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- AACAGAAAU
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5FCJ_170 not in the Motif Atlas
- Homologous match to HL_8P9A_167
- Geometric discrepancy: 0.1459
- The information below is about HL_8P9A_167
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_02452.1
- Basepair signature
- cWW-F-cWH-F-F-F-F
- Number of instances in this motif group
- 8
Unit IDs
5FCJ|1|5|A|2673
5FCJ|1|5|A|2674
5FCJ|1|5|C|2675
5FCJ|1|5|A|2676
5FCJ|1|5|G|2677
5FCJ|1|5|A|2678
5FCJ|1|5|A|2679
5FCJ|1|5|A|2680
5FCJ|1|5|U|2681
Current chains
- Chain 5
- 25S ribosomal RNA
Nearby chains
- Chain m1
- 60S ribosomal protein L11-A
- Chain sM
- Suppressor protein STM1,Suppressor protein STM1,Suppressor protein STM1,Suppressor protein STM1,Suppressor protein STM1
Coloring options: