HL_5FCJ_204

3D structure

PDB id

5FCJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the anisomycin-containing uL3 W255C mutant 80S yeast ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

CGUAUUG

Length

7 nucleotides

Bulged bases

5FCJ|1|6|U|779, 5FCJ|1|6|U|781, 5FCJ|1|6|U|782

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5FCJ_204 not in the Motif Atlas

Homologous match to HL_8P9A_207

Geometric discrepancy: 0.1507

The information below is about HL_8P9A_207

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_89167.2

Basepair signature

cWW-F-F

Number of instances in this motif group

22

Unit IDs

5FCJ|1|6|C|777
5FCJ|1|6|G|778
5FCJ|1|6|U|779
5FCJ|1|6|A|780
5FCJ|1|6|U|781
5FCJ|1|6|U|782
5FCJ|1|6|G|783

Current chains

Chain 6

18S ribosomal RNA

Nearby chains

Chain d4

40S ribosomal protein S24-A

Chain s4

40S ribosomal protein S4-A