HL_5FL8_023
3D structure
- PDB id
- 5FL8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYO-EM STRUCTURE OF THE RIX1-REA1 PRE-60S PARTICLE
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 9.5 Å
Loop
- Sequence
- CAGGGUUGAUAUGAUGCCCUG
- Length
- 21 nucleotides
- Bulged bases
- 5FL8|1|x|G|1349, 5FL8|1|x|A|1350, 5FL8|1|x|U|1351, 5FL8|1|x|A|1352, 5FL8|1|x|U|1356
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5FL8|1|x|C|1342
5FL8|1|x|A|1343
5FL8|1|x|G|1344
5FL8|1|x|G|1345
5FL8|1|x|G|1346
5FL8|1|x|U|1347
5FL8|1|x|U|1348
5FL8|1|x|G|1349
5FL8|1|x|A|1350
5FL8|1|x|U|1351
5FL8|1|x|A|1352
5FL8|1|x|U|1353
5FL8|1|x|G|1354
5FL8|1|x|A|1355
5FL8|1|x|U|1356
5FL8|1|x|G|1357
5FL8|1|x|C|1358
5FL8|1|x|C|1359
5FL8|1|x|C|1360
5FL8|1|x|U|1361
5FL8|1|x|G|1362
Current chains
- Chain x
- 25S ribosomal RNA
Nearby chains
- Chain C
- 60S ribosomal protein L4-A
- Chain E
- 60S ribosomal protein L6-A
- Chain F
- 60S ribosomal protein L7-A
- Chain Q
- 60S ribosomal protein L18-A
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