HL_5FL8_044

3D structure

PDB id

5FL8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYO-EM STRUCTURE OF THE RIX1-REA1 PRE-60S PARTICLE

Experimental method

ELECTRON MICROSCOPY

Resolution

9.5 Å

Loop

Sequence

CAUGAAAGUG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5FL8|1|x|C|2742
5FL8|1|x|A|2743
5FL8|1|x|U|2744
5FL8|1|x|G|2745
5FL8|1|x|A|2746
5FL8|1|x|A|2747
5FL8|1|x|A|2748
5FL8|1|x|G|2749
5FL8|1|x|U|2750
5FL8|1|x|G|2751

Current chains

Chain x

25S ribosomal RNA

Nearby chains

Chain D

60S ribosomal protein L5

Chain z

5S ribosomal RNA; 5S rRNA