HL_5FL8_057
3D structure
- PDB id
- 5FL8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYO-EM STRUCTURE OF THE RIX1-REA1 PRE-60S PARTICLE
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 9.5 Å
Loop
- Sequence
- UCUGAAUGUCAAAGUGAAGAAAUUCAACCAAGCGCGG
- Length
- 37 nucleotides
- Bulged bases
- 5FL8|1|x|U|2205, 5FL8|1|x|U|2209, 5FL8|1|x|A|2222
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5FL8|1|x|U|2203
5FL8|1|x|C|2204
5FL8|1|x|U|2205
5FL8|1|x|G|2206
5FL8|1|x|A|2207
5FL8|1|x|A|2208
5FL8|1|x|U|2209
5FL8|1|x|G|2210
5FL8|1|x|U|2211
5FL8|1|x|C|2212
5FL8|1|x|A|2213
5FL8|1|x|A|2214
5FL8|1|x|A|2215
5FL8|1|x|G|2216
5FL8|1|x|U|2217
5FL8|1|x|G|2218
5FL8|1|x|A|2219
5FL8|1|x|A|2220
5FL8|1|x|G|2221
5FL8|1|x|A|2222
5FL8|1|x|A|2223
5FL8|1|x|A|2224
5FL8|1|x|U|2225
5FL8|1|x|U|2226
5FL8|1|x|C|2227
5FL8|1|x|A|2228
5FL8|1|x|A|2229
5FL8|1|x|C|2230
5FL8|1|x|C|2231
5FL8|1|x|A|2232
5FL8|1|x|A|2233
5FL8|1|x|G|2234
5FL8|1|x|C|2235
5FL8|1|x|G|2236
5FL8|1|x|C|2237
5FL8|1|x|G|2238
5FL8|1|x|G|2239
Current chains
- Chain x
- 25S ribosomal RNA
Nearby chains
- Chain A
- 60S ribosomal protein L2-A
- Chain i
- 60S ribosomal protein L36-A
- Chain r
- Protein SDA1
Coloring options: