HL_5GAH_001

3D structure

PDB id

5GAH (explore in PDB, NAKB, or RNA 3D Hub)

Description

RNC in complex with SRP with detached NG domain

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

CGGAAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5GAH_001 not in the Motif Atlas

Homologous match to HL_4XCO_004

Geometric discrepancy: 0.2093

The information below is about HL_4XCO_004

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_34789.2

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

397

Unit IDs

5GAH|1|1|C|52
5GAH|1|1|G|53
5GAH|1|1|G|54
5GAH|1|1|A|55
5GAH|1|1|A|56
5GAH|1|1|G|57

Current chains

Chain 1

SRP 4.5S RNA

Nearby chains