HL_5H4P_012

3D structure

PDB id

5H4P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structural snapshot of cytoplasmic pre-60S ribosomal particles bound with Nmd3, Lsg1, Tif6 and Reh1

Experimental method

ELECTRON MICROSCOPY

Resolution

3.07 Å

Loop

Sequence

UGCCUCGGUA

Length

10 nucleotides

Bulged bases

5H4P|1|1|U|545, 5H4P|1|1|C|546

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5H4P|1|1|U|541
5H4P|1|1|G|542
5H4P|1|1|C|543
5H4P|1|1|C|544
5H4P|1|1|U|545
5H4P|1|1|C|546
5H4P|1|1|G|547
5H4P|1|1|G|548
5H4P|1|1|U|549
5H4P|1|1|A|550

Current chains

Chain 1

25S ribosomal RNA

Nearby chains

Chain H

60S ribosomal protein L9-A