HL_5H4P_027

3D structure

PDB id

5H4P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structural snapshot of cytoplasmic pre-60S ribosomal particles bound with Nmd3, Lsg1, Tif6 and Reh1

Experimental method

ELECTRON MICROSCOPY

Resolution

3.07 Å

Loop

Sequence

GGUGGCCAUGGAAGUCGGAAUCC

Length

23 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5H4P|1|1|G|1233
5H4P|1|1|G|1234
5H4P|1|1|U|1235
5H4P|1|1|G|1236
5H4P|1|1|G|1237
5H4P|1|1|C|1238
5H4P|1|1|C|1239
5H4P|1|1|A|1240
5H4P|1|1|U|1241
5H4P|1|1|G|1242
5H4P|1|1|G|1243
5H4P|1|1|A|1244
5H4P|1|1|A|1245
5H4P|1|1|G|1246
5H4P|1|1|U|1247
5H4P|1|1|C|1248
5H4P|1|1|G|1249
5H4P|1|1|G|1250
5H4P|1|1|A|1251
5H4P|1|1|A|1252
5H4P|1|1|U|1253
5H4P|1|1|C|1254
5H4P|1|1|C|1255

Current chains

Chain 1

25S ribosomal RNA

Nearby chains