HL_5H4P_082

3D structure

PDB id

5H4P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structural snapshot of cytoplasmic pre-60S ribosomal particles bound with Nmd3, Lsg1, Tif6 and Reh1

Experimental method

ELECTRON MICROSCOPY

Resolution

3.07 Å

Loop

Sequence

CAGUCAAGCGUUCAUAGCGACAUUG

Length

25 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5H4P|1|1|C|2832
5H4P|1|1|A|2833
5H4P|1|1|G|2834
5H4P|1|1|U|2835
5H4P|1|1|C|2836
5H4P|1|1|A|2837
5H4P|1|1|A|2838
5H4P|1|1|G|2839
5H4P|1|1|C|2840
5H4P|1|1|G|2841
5H4P|1|1|U|2842
5H4P|1|1|U|2843
5H4P|1|1|C|2844
5H4P|1|1|A|2845
5H4P|1|1|U|2846
5H4P|1|1|A|2847
5H4P|1|1|G|2848
5H4P|1|1|C|2849
5H4P|1|1|G|2850
5H4P|1|1|A|2851
5H4P|1|1|C|2852
5H4P|1|1|A|2853
5H4P|1|1|U|2854
5H4P|1|1|U|2855
5H4P|1|1|G|2856

Current chains

Chain 1

25S ribosomal RNA

Nearby chains

Chain 3

5S ribosomal RNA; 5S rRNA