HL_5H5U_028

3D structure

PDB id

5H5U (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mechanistic insights into the alternative translation termination by ArfA and RF2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.01 Å

Loop

Sequence

GGGUCACUU

Length

9 nucleotides

Bulged bases

5H5U|1|A|A|892

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5H5U|1|A|G|881
5H5U|1|A|G|882
5H5U|1|A|G|883
5H5U|1|A|U|884
5H5U|1|A|C|885
5H5U|1|A|A|892
5H5U|1|A|C|893
5H5U|1|A|U|894
5H5U|1|A|U|895

Current chains

Chain A

23S rRNA

Nearby chains

Chain t

30S ribosomal protein S13