3D structure

PDB id
5H5U (explore in PDB, NAKB, or RNA 3D Hub)
Description
Mechanistic insights into the alternative translation termination by ArfA and RF2
Experimental method
ELECTRON MICROSCOPY
Resolution
3.01 Å

Loop

Sequence
CCUUCGGG
Length
8 nucleotides
Bulged bases
5H5U|1|h|U|209
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

5H5U|1|h|C|206
5H5U|1|h|C|207
5H5U|1|h|U|208
5H5U|1|h|U|209
5H5U|1|h|C|210
5H5U|1|h|G|211
5H5U|1|h|G|212
5H5U|1|h|G|213

Current chains

Chain h
16S rRNA

Nearby chains

No other chains within 10Å

Coloring options:

Copyright 2025 BGSU RNA group. Page generated in 0.1746 s