HL_5HAU_028

3D structure

PDB id

5HAU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of antimicrobial peptide Bac7(1-19) bound to the Thermus thermophilus 70S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

GUUGGCUUAGAAGCAGCCAUC

Length

21 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5HAU|1|1A|G|1104
5HAU|1|1A|U|1105
5HAU|1|1A|U|1106
5HAU|1|1A|G|1107
5HAU|1|1A|G|1108
5HAU|1|1A|C|1109
5HAU|1|1A|U|1110
5HAU|1|1A|U|1111
5HAU|1|1A|A|1112
5HAU|1|1A|G|1113
5HAU|1|1A|A|1114
5HAU|1|1A|A|1115
5HAU|1|1A|G|1116
5HAU|1|1A|C|1117
5HAU|1|1A|A|1118
5HAU|1|1A|G|1119
5HAU|1|1A|C|1120
5HAU|1|1A|C|1121
5HAU|1|1A|A|1122
5HAU|1|1A|U|1123
5HAU|1|1A|C|1124

Current chains

Chain 1A

23S Ribosomal RNA

Nearby chains

Chain 1K

50S ribosomal protein L11

Chain 1O

50S ribosomal protein L16

Chain 1z

Chimera protein of 50S ribosomal protein L9 and Elongation factor G