HL_5HAU_208
3D structure
- PDB id
- 5HAU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of antimicrobial peptide Bac7(1-19) bound to the Thermus thermophilus 70S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- GAUCAGCCAUGC
- Length
- 12 nucleotides
- Bulged bases
- 5HAU|1|2a|U|1347
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5HAU_208 not in the Motif Atlas
- Homologous match to HL_4LFB_030
- Geometric discrepancy: 0.109
- The information below is about HL_4LFB_030
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_06226.4
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
5HAU|1|2a|G|1338
5HAU|1|2a|A|1339
5HAU|1|2a|U|1340
5HAU|1|2a|C|1341
5HAU|1|2a|A|1342
5HAU|1|2a|G|1343
5HAU|1|2a|C|1344
5HAU|1|2a|C|1345
5HAU|1|2a|A|1346
5HAU|1|2a|U|1347
5HAU|1|2a|G|1348
5HAU|1|2a|C|1349
Current chains
- Chain 2a
- 16S Ribosomal RNA
Nearby chains
- Chain 2c
- 30S ribosomal protein S3
- Chain 2i
- 30S ribosomal protein S9
- Chain 2j
- 30S ribosomal protein S10
- Chain 2m
- 30S ribosomal protein S13
- Chain 2n
- 30S ribosomal protein S14 type Z
- Chain 2u
- 30S ribosomal protein Thx
Coloring options: