HL_5HR7_005
3D structure
- PDB id
- 5HR7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- X-ray crystal structure of C118A RlmN from Escherichia coli with cross-linked in vitro transcribed tRNA
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.4 Å
Loop
- Sequence
- CCUUUCACG
- Length
- 9 nucleotides
- Bulged bases
- 5HR7|1|D|U|33, 5HR7|1|D|U|34, 5HR7|1|D|U|35, 5HR7|1|D|A|37
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_23696.1
- Basepair signature
- cWW-F-F
- Number of instances in this motif group
- 8
Unit IDs
5HR7|1|D|C|31
5HR7|1|D|C|32
5HR7|1|D|U|33
5HR7|1|D|U|34
5HR7|1|D|U|35
5HR7|1|D|C|36
5HR7|1|D|A|37
5HR7|1|D|C|38
5HR7|1|D|G|39
Current chains
- Chain D
- tRNA Glu
Nearby chains
- Chain A
- Dual-specificity RNA methyltransferase RlmN
Coloring options: