HL_5HR7_006
3D structure
- PDB id
- 5HR7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- X-ray crystal structure of C118A RlmN from Escherichia coli with cross-linked in vitro transcribed tRNA
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.4 Å
Loop
- Sequence
- GUUCGAAUC
- Length
- 9 nucleotides
- Bulged bases (A, C, G, U)
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- T-loop with 2 stacked bulged bases
- Broad Annotation
- T-loop
- Motif group
- HL_22280.5
- Basepair signature
- cWW-tWH-F-F-F-F-F
- Number of instances in this motif group
- 71
Unit IDs
5HR7|1|D|G|52
5HR7|1|D|U|53
5HR7|1|D|U|54
5HR7|1|D|C|55
5HR7|1|D|G|56
5HR7|1|D|A|57
5HR7|1|D|A|58
5HR7|1|D|U|59
5HR7|1|D|C|60
Current chains
- Chain D
- tRNA Glu
Nearby chains
No other chains within 10ÅColoring options: