HL_5I4L_228
3D structure
- PDB id
- 5I4L (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of Amicoumacin A bound to the yeast 80S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- GAAUUCAUUUUC
- Length
- 12 nucleotides
- Bulged bases
- 5I4L|1|1|C|2539, 5I4L|1|1|A|2540, 5I4L|1|1|U|2541
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5I4L|1|1|G|2534
5I4L|1|1|A|2535
5I4L|1|1|A|2536
5I4L|1|1|U|2537
5I4L|1|1|U|2538
5I4L|1|1|C|2539
5I4L|1|1|A|2540
5I4L|1|1|U|2541
5I4L|1|1|U|2542
5I4L|1|1|U|2543
5I4L|1|1|U|2544
5I4L|1|1|C|2545
Current chains
- Chain 1
- 25S ribosomal RNA
Nearby chains
- Chain L8
- 60S ribosomal protein L8-A
- Chain O4
- 60S ribosomal protein L34-A
- Chain S1
- 40S ribosomal protein S1-A
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