HL_5I4L_231
3D structure
- PDB id
- 5I4L (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of Amicoumacin A bound to the yeast 80S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- CAUGGCCUUGUGCUGG
- Length
- 16 nucleotides
- Bulged bases
- 5I4L|1|2|U|277, 5I4L|1|2|U|278, 5I4L|1|2|U|280
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5I4L|1|2|C|270
5I4L|1|2|A|271
5I4L|1|2|U|272
5I4L|1|2|G|273
5I4L|1|2|G|274
5I4L|1|2|C|275
5I4L|1|2|C|276
5I4L|1|2|U|277
5I4L|1|2|U|278
5I4L|1|2|G|279
5I4L|1|2|U|280
5I4L|1|2|G|281
5I4L|1|2|C|282
5I4L|1|2|U|283
5I4L|1|2|G|284
5I4L|1|2|G|285
Current chains
- Chain 2
- 18S ribosomal RNA
Nearby chains
- Chain S6
- 40S ribosomal protein S6-A
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