HL_5I4L_239

3D structure

PDB id

5I4L (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of Amicoumacin A bound to the yeast 80S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

UCCUUGUGG

Length

9 nucleotides

Bulged bases

5I4L|1|6|U|718, 5I4L|1|6|U|719

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5I4L|1|6|U|715
5I4L|1|6|C|716
5I4L|1|6|C|717
5I4L|1|6|U|718
5I4L|1|6|U|719
5I4L|1|6|G|720
5I4L|1|6|U|721
5I4L|1|6|G|722
5I4L|1|6|G|723

Current chains

Chain 6

18S ribosomal RNA

Nearby chains