HL_5IB7_060

3D structure

PDB id

5IB7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet, near-cognate tRNALys with U-G mismatch in the A-site and antibiotic paromomycin

Experimental method

X-RAY DIFFRACTION

Resolution

2.99 Å

Loop

Sequence

CGGACACUGGUCGAG

Length

15 nucleotides

Bulged bases

5IB7|1|14|C|1049, 5IB7|1|14|A|1050, 5IB7|1|14|C|1104

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5IB7|1|14|C|1043
5IB7|1|14|G|1044
5IB7|1|14|G|1047
5IB7|1|14|A|1048
5IB7|1|14|C|1049
5IB7|1|14|A|1050
5IB7|1|14|C|1104
5IB7|1|14|U|1105
5IB7|1|14|G|1106
5IB7|1|14|G|1107
5IB7|1|14|U|1108
5IB7|1|14|C|1109
5IB7|1|14|G|1110
5IB7|1|14|A|1111
5IB7|1|14|G|1112

Current chains

Chain 14

23S ribosomal RNA

Nearby chains

Chain 59

50S ribosomal protein L6