HL_5IB7_221
3D structure
- PDB id
- 5IB7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet, near-cognate tRNALys with U-G mismatch in the A-site and antibiotic paromomycin
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.99 Å
Loop
- Sequence
- CAGGAG
- Length
- 6 nucleotides
- Bulged bases
- 5IB7|1|3L|G|18, 5IB7|1|3L|A|21
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5IB7_221 not in the Motif Atlas
- Homologous match to HL_5E81_219
- Geometric discrepancy: 0.2467
- The information below is about HL_5E81_219
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5IB7|1|3L|C|13
5IB7|1|3L|A|14
5IB7|1|3L|G|15
5IB7|1|3L|G|18
5IB7|1|3L|A|21
5IB7|1|3L|G|22
Current chains
- Chain 3L
- tRNALys
Nearby chains
No other chains within 10ÅColoring options: