HL_5IBB_060

3D structure

PDB id

5IBB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAVal in the A-site

Experimental method

X-RAY DIFFRACTION

Resolution

2.96 Å

Loop

Sequence

CCGCGGACAGGAGUGG

Length

16 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5IBB|1|14|C|1040
5IBB|1|14|C|1041
5IBB|1|14|G|1042
5IBB|1|14|C|1043
5IBB|1|14|G|1044
5IBB|1|14|G|1047
5IBB|1|14|A|1048
5IBB|1|14|C|1049
5IBB|1|14|A|1050
5IBB|1|14|G|1051
5IBB|1|14|G|1110
5IBB|1|14|A|1111
5IBB|1|14|G|1112
5IBB|1|14|U|1113
5IBB|1|14|G|1114
5IBB|1|14|G|1115

Current chains

Chain 14

23S ribosomal RNA

Nearby chains

Chain 59

50S ribosomal protein L6

Chain D5

50S ribosomal protein L25