HL_5IBB_223
3D structure
- PDB id
- 5IBB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAVal in the A-site
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.96 Å
Loop
- Sequence
- GGCGGUUCGAUCCCGUC
- Length
- 17 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_41333.1
- Basepair signature
- cWW-bif-cWW-cWW-R-R-R-R-R-R-R-R-R-R
- Number of instances in this motif group
- 1
Unit IDs
5IBB|1|3L|G|49
5IBB|1|3L|G|50
5IBB|1|3L|C|51
5IBB|1|3L|G|52
5IBB|1|3L|G|53
5IBB|1|3L|U|54
5IBB|1|3L|U|55
5IBB|1|3L|C|56
5IBB|1|3L|G|57
5IBB|1|3L|A|58
5IBB|1|3L|U|59
5IBB|1|3L|C|60
5IBB|1|3L|C|61
5IBB|1|3L|C|62
5IBB|1|3L|G|63
5IBB|1|3L|U|64
5IBB|1|3L|C|65
Current chains
- Chain 3L
- tRNAVal
Nearby chains
- Chain 14
- Large subunit ribosomal RNA; LSU rRNA
- Chain 79
- 50S ribosomal protein L1
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