HL_5IMQ_014

3D structure

PDB id

5IMQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of ribosome bound to cofactor at 3.8 angstrom resolution

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

CUGAGACACGG

Length

11 nucleotides

Bulged bases

5IMQ|1|A|C|328

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5IMQ|1|A|C|322
5IMQ|1|A|U|323
5IMQ|1|A|G|324
5IMQ|1|A|A|325
5IMQ|1|A|G|326
5IMQ|1|A|A|327
5IMQ|1|A|C|328
5IMQ|1|A|A|329
5IMQ|1|A|C|330
5IMQ|1|A|G|331
5IMQ|1|A|G|332

Current chains

Chain A

16S ribosomal RNA

Nearby chains

Chain T

30S ribosomal protein S16

Chain X

30S ribosomal protein S20