HL_5IMQ_032

3D structure

PDB id

5IMQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of ribosome bound to cofactor at 3.8 angstrom resolution

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GUUCGGC

Length

7 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5IMQ_032 not in the Motif Atlas

Homologous match to HL_6CZR_097

Geometric discrepancy: 0.5025

The information below is about HL_6CZR_097

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5IMQ|1|A|G|1134
5IMQ|1|A|U|1135
5IMQ|1|A|U|1136
5IMQ|1|A|C|1137
5IMQ|1|A|G|1138
5IMQ|1|A|G|1139
5IMQ|1|A|C|1140

Current chains

Chain A

16S ribosomal RNA

Nearby chains