HL_5IMQ_063

3D structure

PDB id

5IMQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of ribosome bound to cofactor at 3.8 angstrom resolution

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GCUAGGGGGCCCACCAGCCUACCAAAC

Length

27 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5IMQ|1|D|G|875
5IMQ|1|D|C|876
5IMQ|1|D|U|877
5IMQ|1|D|A|878
5IMQ|1|D|G|879
5IMQ|1|D|G|880
5IMQ|1|D|G|881
5IMQ|1|D|G|882
5IMQ|1|D|G|883
5IMQ|1|D|C|884
5IMQ|1|D|C|885
5IMQ|1|D|C|886
5IMQ|1|D|A|887
5IMQ|1|D|C|888
5IMQ|1|D|C|889
5IMQ|1|D|A|890
5IMQ|1|D|G|892
5IMQ|1|D|C|893
5IMQ|1|D|C|894
5IMQ|1|D|U|895
5IMQ|1|D|A|896
5IMQ|1|D|C|897
5IMQ|1|D|C|898
5IMQ|1|D|A|899
5IMQ|1|D|A|900
5IMQ|1|D|A|901
5IMQ|1|D|C|902

Current chains

Chain D

23S ribosomal RNA

Nearby chains

Chain Q

30S ribosomal protein S13

Chain i

50S ribosomal protein L16

Chain r

50S ribosomal protein L25