HL_5IQR_027

3D structure

PDB id

5IQR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of RelA bound to the 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GAAACAAC

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5IQR_027 not in the Motif Atlas

Homologous match to HL_5J7L_160

Geometric discrepancy: 0.1084

The information below is about HL_5J7L_160

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_42998.2

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

7

Unit IDs

5IQR|1|1|G|978
5IQR|1|1|A|979
5IQR|1|1|A|980
5IQR|1|1|A|981
5IQR|1|1|C|982
5IQR|1|1|A|983
5IQR|1|1|A|984
5IQR|1|1|C|985

Current chains

Chain 1

LSU rRNA

Nearby chains

Chain Q

50S ribosomal protein L20

Chain R

50S ribosomal protein L21

Chain Z

50S ribosomal protein L30