HL_5IQR_074

3D structure

PDB id

5IQR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of RelA bound to the 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CUUCGG

Length

6 nucleotides

Bulged bases

5IQR|1|2|U|209, 5IQR|1|2|C|210

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5IQR_074 not in the Motif Atlas

Geometric match to HL_5J7L_005

Geometric discrepancy: 0.3276

The information below is about HL_5J7L_005

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_34617.5

Basepair signature

cWW-tSW-F

Number of instances in this motif group

57

Unit IDs

5IQR|1|2|C|207
5IQR|1|2|U|208
5IQR|1|2|U|209
5IQR|1|2|C|210
5IQR|1|2|G|211
5IQR|1|2|G|212

Current chains

Chain 2

SSU rRNA

Nearby chains