HL_5IQR_095

3D structure

PDB id

5IQR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of RelA bound to the 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

UGAUAAA

Length

7 nucleotides

Bulged bases

5IQR|1|2|U|1168

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5IQR_095 not in the Motif Atlas

Homologous match to HL_5J7L_026

Geometric discrepancy: 0.1874

The information below is about HL_5J7L_026

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_93535.1

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

6

Unit IDs

5IQR|1|2|U|1165
5IQR|1|2|G|1166
5IQR|1|2|A|1167
5IQR|1|2|U|1168
5IQR|1|2|A|1169
5IQR|1|2|A|1170
5IQR|1|2|A|1171

Current chains

Chain 2

SSU rRNA

Nearby chains

Chain g

30S ribosomal protein S2