HL_5IQR_111
3D structure
- PDB id
- 5IQR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of RelA bound to the 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- G(5MU)(PSU)CGAUUC
- Length
- 9 nucleotides
- Bulged bases
- 5IQR|1|6|C|56, 5IQR|1|6|G|57
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5IQR_111 not in the Motif Atlas
- Homologous match to HL_5L4O_003
- Geometric discrepancy: 0.315
- The information below is about HL_5L4O_003
- Detailed Annotation
- T-loop with 2 stacked bulged bases
- Broad Annotation
- T-loop
- Motif group
- HL_43993.1
- Basepair signature
- cWW-tWH-F-F-F-F-F
- Number of instances in this motif group
- 141
Unit IDs
5IQR|1|6|G|53
5IQR|1|6|5MU|54
5IQR|1|6|PSU|55
5IQR|1|6|C|56
5IQR|1|6|G|57
5IQR|1|6|A|58
5IQR|1|6|U|59
5IQR|1|6|U|60
5IQR|1|6|C|61
Current chains
- Chain 6
- A/T tRNA(Phe)
Nearby chains
- Chain 1
- Large subunit ribosomal RNA; LSU rRNA
- Chain F
- 50S ribosomal protein L6
- Chain I
- 50S ribosomal protein L11
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