HL_5IWA_018
3D structure
- PDB id
- 5IWA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the 30S ribosomal subunit from Thermus thermophilus in complex with the GE81112 peptide antibiotic
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.5 Å
Loop
- Sequence
- GUCUC
- Length
- 5 nucleotides
- Bulged bases
- 5IWA|1|A|U|839
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5IWA_018 not in the Motif Atlas
- Homologous match to HL_4LFB_018
- Geometric discrepancy: 0.4419
- The information below is about HL_4LFB_018
- Detailed Annotation
- Mini UNCG
- Broad Annotation
- No text annotation
- Motif group
- HL_48778.2
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 46
Unit IDs
5IWA|1|A|G|838
5IWA|1|A|U|839
5IWA|1|A|C|840
5IWA|1|A|U|841
5IWA|1|A|C|848
Current chains
- Chain A
- 16S ribosomal RNA
Nearby chains
- Chain B
- 30S ribosomal protein S2
Coloring options: