HL_5J30_041
3D structure
- PDB id
- 5J30 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Thermus thermophilus 70S termination complex containing E. coli RF1
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.2 Å
Loop
- Sequence
- GAAACAUC
- Length
- 8 nucleotides
- Bulged bases
- 5J30|1|RA|A|196
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5J30_041 not in the Motif Atlas
- Geometric match to HL_7RQB_006
- Geometric discrepancy: 0.0491
- The information below is about HL_7RQB_006
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_06192.2
- Basepair signature
- cWW-tSH-F-F
- Number of instances in this motif group
- 14
Unit IDs
5J30|1|RA|G|194
5J30|1|RA|A|195
5J30|1|RA|A|196
5J30|1|RA|A|197
5J30|1|RA|C|198
5J30|1|RA|A|199
5J30|1|RA|U|200
5J30|1|RA|C|201
Current chains
- Chain RA
- 23S rRNA
Nearby chains
- Chain R1
- 50S ribosomal protein L28
- Chain RP
- 50S ribosomal protein L15
Coloring options: