HL_5J30_048
3D structure
- PDB id
- 5J30 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Thermus thermophilus 70S termination complex containing E. coli RF1
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.2 Å
Loop
- Sequence
- GUUCGUGGAGC
- Length
- 11 nucleotides
- Bulged bases
- 5J30|1|RA|G|386
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5J30_048 not in the Motif Atlas
- Homologous match to HL_7RQB_013
- Geometric discrepancy: 0.035
- The information below is about HL_7RQB_013
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_91503.4
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
5J30|1|RA|G|382
5J30|1|RA|U|383
5J30|1|RA|U|384
5J30|1|RA|C|385
5J30|1|RA|G|386
5J30|1|RA|U|387
5J30|1|RA|G|388
5J30|1|RA|G|389
5J30|1|RA|A|390
5J30|1|RA|G|391
5J30|1|RA|C|392
Current chains
- Chain RA
- 23S rRNA
Nearby chains
- Chain R1
- 50S ribosomal protein L28
- Chain RP
- 50S ribosomal protein L15
Coloring options: