HL_5J30_170
3D structure
- PDB id
- 5J30 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Thermus thermophilus 70S termination complex containing E. coli RF1
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.2 Å
Loop
- Sequence
- GGUGGCUUAGAAGCAGCCAUCC
- Length
- 22 nucleotides
- Bulged bases
- 5J30|1|YA|A|1067, 5J30|1|YA|G|1068, 5J30|1|YA|C|1072, 5J30|1|YA|C|1076
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5J30|1|YA|G|1058
5J30|1|YA|G|1059
5J30|1|YA|U|1060
5J30|1|YA|G|1062
5J30|1|YA|G|1063
5J30|1|YA|C|1064
5J30|1|YA|U|1065
5J30|1|YA|U|1066
5J30|1|YA|A|1067
5J30|1|YA|G|1068
5J30|1|YA|A|1069
5J30|1|YA|A|1070
5J30|1|YA|G|1071
5J30|1|YA|C|1072
5J30|1|YA|A|1073
5J30|1|YA|G|1074
5J30|1|YA|C|1075
5J30|1|YA|C|1076
5J30|1|YA|A|1077
5J30|1|YA|U|1078
5J30|1|YA|C|1079
5J30|1|YA|C|1080
Current chains
- Chain YA
- 23S rRNA
Nearby chains
- Chain XY
- Peptide chain release factor 1
- Chain YQ
- 50S ribosomal protein L16
Coloring options: