HL_5J3C_013

3D structure

PDB id

5J3C (explore in PDB, NAKB, or RNA 3D Hub)

Description

Thermus thermophilus 70S termination complex containing E. coli RF1

Experimental method

X-RAY DIFFRACTION

Resolution

3.04 Å

Loop

Sequence

GCAGCC(7MG)C

Length

8 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: 7MG

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5J3C_013 not in the Motif Atlas

Homologous match to HL_4LFB_013

Geometric discrepancy: 0.0938

The information below is about HL_4LFB_013

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5J3C|1|QA|G|521
5J3C|1|QA|C|522
5J3C|1|QA|A|523
5J3C|1|QA|G|524
5J3C|1|QA|C|525
5J3C|1|QA|C|526
5J3C|1|QA|7MG|527
5J3C|1|QA|C|528

Current chains

Chain QA

16S rRNA

Nearby chains

Chain QL

30S ribosomal protein S12