HL_5J3C_221

3D structure

PDB id

5J3C (explore in PDB, NAKB, or RNA 3D Hub)

Description

Thermus thermophilus 70S termination complex containing E. coli RF1

Experimental method

X-RAY DIFFRACTION

Resolution

3.04 Å

Loop

Sequence

UUCGUGGAG

Length

9 nucleotides

Bulged bases

5J3C|1|YA|G|386, 5J3C|1|YA|G|389

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5J3C|1|YA|U|383
5J3C|1|YA|U|384
5J3C|1|YA|C|385
5J3C|1|YA|G|386
5J3C|1|YA|U|387
5J3C|1|YA|G|388
5J3C|1|YA|G|389
5J3C|1|YA|A|390
5J3C|1|YA|G|391

Current chains

Chain YA

23S rRNA

Nearby chains

Chain Y1

50S ribosomal protein L28

Chain YP

50S ribosomal protein L15