HL_5J7L_008

3D structure

PDB id

5J7L (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracycline

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

AACUGAGACACGGU

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_81205.3

Basepair signature

cWW-cWW-tWH-F-tWH-F-F-F-F-F

Number of instances in this motif group

2

Unit IDs

5J7L|1|AA|A|320
5J7L|1|AA|A|321
5J7L|1|AA|C|322
5J7L|1|AA|U|323
5J7L|1|AA|G|324
5J7L|1|AA|A|325
5J7L|1|AA|G|326
5J7L|1|AA|A|327
5J7L|1|AA|C|328
5J7L|1|AA|A|329
5J7L|1|AA|C|330
5J7L|1|AA|G|331
5J7L|1|AA|G|332
5J7L|1|AA|U|333

Current chains

Chain AA

16S rRNA

Nearby chains

Chain AP

30S ribosomal protein S16

Chain AT

30S ribosomal protein S20