HL_5J7L_028

3D structure

PDB id

5J7L (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracycline

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CUGCAACUCG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_23932.1

Basepair signature

cWW-tWH-F-F-F

Number of instances in this motif group

40

Unit IDs

5J7L|1|AA|C|1314
5J7L|1|AA|U|1315
5J7L|1|AA|G|1316
5J7L|1|AA|C|1317
5J7L|1|AA|A|1318
5J7L|1|AA|A|1319
5J7L|1|AA|C|1320
5J7L|1|AA|U|1321
5J7L|1|AA|C|1322
5J7L|1|AA|G|1323

Current chains

Chain AA

16S rRNA

Nearby chains

Chain AM

30S ribosomal protein S13

Chain AN

30S ribosomal protein S14

Chain AS

30S ribosomal protein S19