HL_5J7L_087

3D structure

PDB id

5J7L (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracycline

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

GUCAC

Length

5 nucleotides

Bulged bases

5J7L|1|CA|C|885

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5J7L_087 not in the Motif Atlas

Homologous match to HL_5J7L_158

Geometric discrepancy: 0.5701

The information below is about HL_5J7L_158

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5J7L|1|CA|G|883
5J7L|1|CA|U|884
5J7L|1|CA|C|885
5J7L|1|CA|A|892
5J7L|1|CA|C|893

Current chains

Chain CA

23S rRNA

Nearby chains

Chain BS

30S ribosomal protein S19