HL_5J7L_129

3D structure

PDB id

5J7L (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracycline

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CUUUAAG

Length

7 nucleotides

Bulged bases

5J7L|1|CA|U|2797, 5J7L|1|CA|A|2800

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5J7L_129 not in the Motif Atlas

Homologous match to HL_5J7L_200

Geometric discrepancy: 0.0917

The information below is about HL_5J7L_200

Detailed Annotation

Other HL

Broad Annotation

Other HL

Motif group

HL_08100.1

Basepair signature

cWW-F-F-F

Number of instances in this motif group

4

Unit IDs

5J7L|1|CA|C|2795
5J7L|1|CA|U|2796
5J7L|1|CA|U|2797
5J7L|1|CA|U|2798
5J7L|1|CA|A|2799
5J7L|1|CA|A|2800
5J7L|1|CA|G|2801

Current chains

Chain CA

23S rRNA

Nearby chains