HL_5J7L_165
3D structure
- PDB id
- 5J7L (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracycline
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- GUGAAAAGC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- T-loop with 2 stacked bulged bases
- Broad Annotation
- T-loop
- Motif group
- HL_43993.1
- Basepair signature
- cWW-tWH-F-F-F-F-F
- Number of instances in this motif group
- 141
Unit IDs
5J7L|1|DA|G|1281
5J7L|1|DA|U|1282
5J7L|1|DA|G|1283
5J7L|1|DA|A|1284
5J7L|1|DA|A|1285
5J7L|1|DA|A|1286
5J7L|1|DA|A|1287
5J7L|1|DA|G|1288
5J7L|1|DA|C|1289
Current chains
- Chain DA
- 23S rRNA
Nearby chains
- Chain D1
- 50S ribosomal protein L32
- Chain DO
- 50S ribosomal protein L17
- Chain DT
- 50S ribosomal protein L22
Coloring options: