HL_5J7L_178
3D structure
- PDB id
- 5J7L (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracycline
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- UUUAUUAAAAA
- Length
- 11 nucleotides
- Bulged bases
- 5J7L|1|DA|A|1780, 5J7L|1|DA|U|1781, 5J7L|1|DA|U|1782, 5J7L|1|DA|A|1786
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_43613.6
- Basepair signature
- cWW-tWH-tWH-F
- Number of instances in this motif group
- 6
Unit IDs
5J7L|1|DA|U|1777
5J7L|1|DA|U|1778
5J7L|1|DA|U|1779
5J7L|1|DA|A|1780
5J7L|1|DA|U|1781
5J7L|1|DA|U|1782
5J7L|1|DA|A|1783
5J7L|1|DA|A|1784
5J7L|1|DA|A|1785
5J7L|1|DA|A|1786
5J7L|1|DA|A|1787
Current chains
- Chain DA
- 23S rRNA
Nearby chains
- Chain D3
- 50S ribosomal protein L34
- Chain DC
- 50S ribosomal protein L2
Coloring options: