3D structure

PDB id
5J7L (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracycline
Experimental method
X-RAY DIFFRACTION
Resolution
3 Å

Loop

Sequence
UUUAUUAAAAA
Length
11 nucleotides
Bulged bases
5J7L|1|DA|A|1780, 5J7L|1|DA|U|1781, 5J7L|1|DA|U|1782, 5J7L|1|DA|A|1786
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_43613.6
Basepair signature
cWW-tWH-tWH-F
Number of instances in this motif group
6

Unit IDs

5J7L|1|DA|U|1777
5J7L|1|DA|U|1778
5J7L|1|DA|U|1779
5J7L|1|DA|A|1780
5J7L|1|DA|U|1781
5J7L|1|DA|U|1782
5J7L|1|DA|A|1783
5J7L|1|DA|A|1784
5J7L|1|DA|A|1785
5J7L|1|DA|A|1786
5J7L|1|DA|A|1787

Current chains

Chain DA
23S rRNA

Nearby chains

Chain D3
50S ribosomal protein L34
Chain DC
50S ribosomal protein L2

Coloring options:

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