HL_5J7L_187

3D structure

PDB id

5J7L (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracycline

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CUAAAGAGUAACG

Length

13 nucleotides

Bulged bases (A, C, G, U)

2268A, 2275C

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_19870.7

Basepair signature

cWW-tSH-tHH-tWW-F-F-F

Number of instances in this motif group

7

Unit IDs

5J7L|1|DA|C|2264
5J7L|1|DA|U|2265
5J7L|1|DA|A|2266
5J7L|1|DA|A|2267
5J7L|1|DA|A|2268
5J7L|1|DA|G|2269
5J7L|1|DA|A|2270
5J7L|1|DA|G|2271
5J7L|1|DA|U|2272
5J7L|1|DA|A|2273
5J7L|1|DA|A|2274
5J7L|1|DA|C|2275
5J7L|1|DA|G|2276

Current chains

Chain DA

23S rRNA

Nearby chains

Chain DN

50S ribosomal protein L16

Chain DX

50S ribosomal protein L27