HL_5J7L_189
3D structure
- PDB id
- 5J7L (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracycline
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- UGCAAUGG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_12078.5
- Basepair signature
- cWW-F-F-F-F-F
- Number of instances in this motif group
- 29
Unit IDs
5J7L|1|DA|U|2324
5J7L|1|DA|G|2325
5J7L|1|DA|C|2326
5J7L|1|DA|A|2327
5J7L|1|DA|A|2328
5J7L|1|DA|U|2329
5J7L|1|DA|G|2330
5J7L|1|DA|G|2331
Current chains
- Chain DA
- 23S rRNA
Nearby chains
- Chain DF
- 50S ribosomal protein L5
- Chain DN
- 50S ribosomal protein L16
- Chain DX
- 50S ribosomal protein L27
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