HL_5J7L_195

3D structure

PDB id

5J7L (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracycline

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

C(OMU)GUUCG

Length

7 nucleotides

Bulged bases (A, C, G, U)

None detected

QA status

Modified nucleotides: OMU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5J7L_195 not in the Motif Atlas

Homologous match to HL_4WF9_058

Geometric discrepancy: 0.1395

The information below is about HL_4WF9_058

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_22584.1

Basepair signature

cWW-tSW-F

Number of instances in this motif group

22

Unit IDs

5J7L|1|DA|C|2551
5J7L|1|DA|OMU|2552
5J7L|1|DA|G|2553
5J7L|1|DA|U|2554
5J7L|1|DA|U|2555
5J7L|1|DA|C|2556
5J7L|1|DA|G|2557

Current chains

Chain DA

23S rRNA

Nearby chains