HL_5J7L_199

3D structure

PDB id

5J7L (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracycline

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CUGAAAGCAUCUAAG

Length

15 nucleotides

Bulged bases (A, C, G, U)

2751G, 2755C

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_56677.8

Basepair signature

cWW-tWH-tSH-cWH-tSH-tHW-tHW-tSW

Number of instances in this motif group

8

Unit IDs

5J7L|1|DA|C|2745
5J7L|1|DA|U|2746
5J7L|1|DA|G|2747
5J7L|1|DA|A|2748
5J7L|1|DA|A|2749
5J7L|1|DA|A|2750
5J7L|1|DA|G|2751
5J7L|1|DA|C|2752
5J7L|1|DA|A|2753
5J7L|1|DA|U|2754
5J7L|1|DA|C|2755
5J7L|1|DA|U|2756
5J7L|1|DA|A|2757
5J7L|1|DA|A|2758
5J7L|1|DA|G|2759

Current chains

Chain DA

23S rRNA

Nearby chains

Chain D5

50S ribosomal protein L36

Chain DG

50S ribosomal protein L6

Chain DK

50S ribosomal protein L13