HL_5J8A_205

3D structure

PDB id

5J8A (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the E coli 70S ribosome with the U1052G mutation in 16S rRNA bound to tigecycline

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

GGACCUUCGGGC

Length

12 nucleotides

Bulged bases

5J8A|1|AA|U|209

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5J8A|1|AA|G|203
5J8A|1|AA|G|204
5J8A|1|AA|A|205
5J8A|1|AA|C|206
5J8A|1|AA|C|207
5J8A|1|AA|U|208
5J8A|1|AA|U|209
5J8A|1|AA|C|210
5J8A|1|AA|G|211
5J8A|1|AA|G|212
5J8A|1|AA|G|213
5J8A|1|AA|C|214

Current chains

Chain AA

16S rRNA

Nearby chains