HL_5J91_032
3D structure
- PDB id
- 5J91 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the Wild-type 70S E coli ribosome bound to Tigecycline
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.96 Å
Loop
- Sequence
- UUUGAUCAUGG
- Length
- 11 nucleotides
- Bulged bases
- 5J91|1|BA|U|14
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5J91_032 not in the Motif Atlas
- Homologous match to HL_5J7L_001
- Geometric discrepancy: 0.0598
- The information below is about HL_5J7L_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_89881.5
- Basepair signature
- cWW-tHW-F-F-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
5J91|1|BA|U|12
5J91|1|BA|U|13
5J91|1|BA|U|14
5J91|1|BA|G|15
5J91|1|BA|A|16
5J91|1|BA|U|17
5J91|1|BA|C|18
5J91|1|BA|A|19
5J91|1|BA|U|20
5J91|1|BA|G|21
5J91|1|BA|G|22
Current chains
- Chain BA
- 16S rRNA
Nearby chains
- Chain BE
- 30S ribosomal protein S5
- Chain BL
- 30S ribosomal protein S12
Coloring options: