HL_5J91_044

3D structure

PDB id

5J91 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Wild-type 70S E coli ribosome bound to Tigecycline

Experimental method

X-RAY DIFFRACTION

Resolution

2.96 Å

Loop

Sequence

GCAGCC(G7M)C

Length

8 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: G7M

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5J91_044 not in the Motif Atlas

Geometric match to HL_4V9F_003

Geometric discrepancy: 0.2407

The information below is about HL_4V9F_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.6

Basepair signature

cWW-F

Number of instances in this motif group

21

Unit IDs

5J91|1|BA|G|521
5J91|1|BA|C|522
5J91|1|BA|A|523
5J91|1|BA|G|524
5J91|1|BA|C|525
5J91|1|BA|C|526
5J91|1|BA|G7M|527
5J91|1|BA|C|528

Current chains

Chain BA

16S rRNA

Nearby chains

Chain BL

30S ribosomal protein S12