HL_5J91_161

3D structure

PDB id

5J91 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Wild-type 70S E coli ribosome bound to Tigecycline

Experimental method

X-RAY DIFFRACTION

Resolution

2.96 Å

Loop

Sequence

CUUAGAAGCAG

Length

11 nucleotides

Bulged bases

5J91|1|DA|A|1070

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5J91_161 not in the Motif Atlas

Homologous match to HL_5J7L_161

Geometric discrepancy: 0.0173

The information below is about HL_5J7L_161

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_19210.3

Basepair signature

cWW-F-F-F-F-F-F-F-F

Number of instances in this motif group

7

Unit IDs

5J91|1|DA|C|1064
5J91|1|DA|U|1065
5J91|1|DA|U|1066
5J91|1|DA|A|1067
5J91|1|DA|G|1068
5J91|1|DA|A|1069
5J91|1|DA|A|1070
5J91|1|DA|G|1071
5J91|1|DA|C|1072
5J91|1|DA|A|1073
5J91|1|DA|G|1074

Current chains

Chain DA

23S rRNA

Nearby chains

Chain DJ

50S ribosomal protein L11